calendar of student's talk

Date
Speakers
Subject (please link to abstract)
Friday, December 18, 2pm
*Talmon, Caputo



*Larovere, Pastori




*Vicino, Teixeira
Abstract links:
* PMID: 19917133 Asmann 2009: 3' tag digital expression profiling

*PMID: 19846608High- resolution nucleosome mapping reveals transcription dependent promoter packaging.

*PMID: 19169241 Post-transcriptional processing generates a diversity of 5'-modified long and short RNAs. Fejes-Toth,Sotirova et al.
Tuesday, December 22, 2pm

*Iachia Y Baca, Fava


*PMID: 19765810 Zhang 2009. A Genome-wide RNAi Screen for Modifiers of the Circadian Clock in Human Cells. Cell
Friday, January 8, 2pm

COMPLETO ci sono già 6 lavori !

*Macrì D-Macrì M-Raimo (autorizzato data la complessità, inclusi materiali supplementari)




* Foglietta, Gallio



*Porrera, Rapelli



*Mana, Valenti



*Chierto, Daga

*PMID: 19829295
Lister et al. Human DNA methylomes at base resolution show widespread epigenomic differences.

+ suppl.


* PMCID: PMC2206135 14-3-3 Proteins recognize a histone code at histone H3 and are required for transcriptional activation

*PMCID: 2770259 The Schizosaccharomyces pombe JmjC-protein, Msc1, prevents H2A.Z localization in centromeric and subtelomeric chromatin domains.


* PMID: 19037247 Nuclear receptor corepressor and histone deacetylase 3 govern circadian metabolic physiology.


*PMID: 19687298 Chromatin architecture and transcription factor binding regulate expression of erythrocyte membrane protein genes.

Wedensday, January 13, 4 pm
(max two talks)


Thursday, January 14, 4 pm

(max two talks)
Friday, January 15, 2pm

* Béthaz-Ferrero


* Bonzano-Grosso


* Benvenuti, Giordano, Goffi (2 articoli)




*Nato, Ubezzi

*Solia

* PMID: 19335913 Steinhoff 2009: expression profile of imprinted genes

* PMID: 19534766 She X et al.,2009: epigenetics of housekeeping and tissue-enriched genes

*PMCID: PMC2703880 Jean Hausser et all.: MirZ, an integrated microRNA expression

* PMCID: PMC2775596 Jean Hausser et all. :Relative contribution of sequence and structure features to the mRNA binding

*PMID: 19846761 26G endo-siRNAs regulate spermatogenic and zygotic
gene expression in Caenorhabditis elegans

*PMID: 19874056 Rapid determination of RNA accessible sites by surface plasmon resonance detection of hybridization to DNA arrays. Mandir 2009

Wedensday, January 20, 4pm


*De Martino-Marra-Pace





Silvia Boschi, Valeria Marmo







PMID: 20044349
Molecular mechanisms of eukaryotic pre-mRNA 3' end processing regulation
PMID: 20043923
Alternative splicing regulatory network reconstruction from exon array data

PMID: 19716791
"Altered nuclear retention of mRNAs containing inverted repeats in human embryonic stem cells: functional role of a nuclear noncoding RNA" Chen LL, Carmichael GG 2009.

Thursday, January 21, 2 pm








*Filice, Licheri

*Cipriani, De Nicolò

*Chiovatero, Palmara

*Macchia, Morando



PMCID: PMC2661803
The dynamic DNA methylomes of double - stranded DNA viruses associated with human cancer

*PMID: 19910374 Functional properties and evolutionary splicing constraints on a composite exonic regulatory element of splicing in CFTR exon 12

*PMID: 19528076 Detection of single nucleotide variations in expressed exons of the human genome using RNA-Seq.

*PMID: 19214204 Chittaranjan S. et al, 2009: Steroid hormone control of cell death and cell survival: molecular insights using RNAi

Friday, January 22, 2pm

De Stasi Angela Michela



Parrini Martina, Pugliese Maria Lucia







Giada Pertosa e Angelica Foggetti










*Di Croce, Bono







*Rugolo

 

 

 

 *Calfapietra, La Montagna

*PMCID: PMC2742397

"Inactive X chromosome-specific reduction in placental DNA methylation"
Emily L. Petty et al.2009 .

*PMCID: PMC2694474

"Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver" Alayne L. Brunner et al.2009


PMID: 19762510

"An inducible change in Fox-1/A2BP1 splicing modulates the alternative splicing of downstream neuronal target exons"

Lee JA, Tang ZZ, Black DL 2009



*PMID: 19073934 RNA interference and retinoblastoma-related genes are required for repression of endogenous siRNA targets in C.elegans


PMID: 19182803
Differential chromatin marking of introns and expressed exons by H3K36me3.
Paulina Kolasinska-Zwierz et al. 2009

PMID: 19923923 :Epigenetic control of the expression of a primate-specific microRNA cluster in human cancer cells. 2009 Nov;4


Notes and comments:
You may try to put other dates if needed, but they need Prof' approval.
EXCEPT Tuesday January 12: De Bortoli won't be in Turin!