Per favore PRIMA di editare, leggete le informazioni "Subjects for Student talks",
NOTA: Per inserire i vostri dati in Tabella: per favore seguite le istruzioni!

Iscrivetevi in ciascuno slot temporale, a gruppi di 2 studenti, con un max di 4 gruppi per giorno (5 solo proprio in casi "disperati").
Nella casella di destra indicate il titolo del lavoro scelto e se possibile il link.
Vi consiglio di prenotare lo slot temporale "prima" di avere scelto il lavoro: nello stesso tempo, mettete il lavoro appena lo avete scelto, per evitare che altri scelgano lo stesso.
Gli argomenti principali:
1) microarrays di espressione e RNA Seq - qualsiasi situazione sperimentale, purchè il lavoro descriva con dovuta ampiezza il tipo di analisi, i risultati e, soprattutto, la funzione dei risultati ovvero l'interpretazione ed applicazione.
2) modificazioni epigenetiche, eucromatina ed eterocromatina, studi genome-wide sulla localizzazione di geni, promotori, sequenze silenti o trascritte, isolatori, elementi funzionali di vario tipo.
3) Studi genome-wide sullo splicing alternativo e sulla sua regolazione in qualsiasi modello sperimentale.
4) noncoding RNA: studi di enumerazione e di funzione collettiva. MicroRNA, siRNA, piRNA, long-noncoding RNA.
5) Regolazione trascizionale: fattori di trascrizione, coattivatori, corepressori, studi genome-wide di funzione, ChIP-chip e ChIp-Seq.
6) Regolazione post-trascrizionale: regolazione stabilità mRNA, localizzazione mRNA, proteine leganti RNA sempre con profilo genome-wide.
Si raccomandano Riviste primarie e ultimi due anni (2009 e 2010).
Nature
Nature Cell Biology
Nature Genetics
Science
Cell
Molecular Cell
Genes & Development
PLOS Biology (NO: PLOS One)
PNAS (proc Natl Acad Sci US)
per altri giornali chiedere

Date	group	title	link to paper - status	Sta tus
Wed. Dec 15, 4pm	Gho - Bovio	Modulation of miRna processing by p53	LINK to paper	OK
	Mana - Morano	Reversible Block of Mouse Neural Stem Cell Differentiation in the Absence of Dicer and MicroRNAs	LINK to paper	OK
	Martina - Gigliotti	The honey bee epigenomes: differential methylation of brain DNA in queens and workers	LINK to paper	OK
	Joffrain - Biolatti	The human cytomegalovirus microRNA miR-UL112 acts synergistically with a cellular microRNA to escape immune elimination	LINK to paper	OK
Fri. Dec 17, 11am	Nigro - Marzanati	A Methyl tranferase links the circadian clock to the regulation of alternative splicing	LINK to paper	OK
	Ferrero-Ruvolo		LINK to paper	OK
	Bonetto-Magi	A Pilot Study of Circulating miRNAs as Potential Biomarkers of Early Stage Breast Cancer	LINK to paper	OK
Mon. Dec 20, 11am	Ceolato-Galliani	Epigenetic memory in induced pluripotent stem cells	LINK to paper	OK
	Gullà-Arizzi	Characterization of RNA content of chromatin	<> Link to paper	OK
Mon. Jan 10, 11am	Collino-Minuzzo	A dicer-independent miRNA biogenesis pathway that requires Ago catalysis	Link to paper	OK
	Alessandria-Orlandi	Discovering hematopoietic mechanisms through Genome-wide analysis of GATA factor chromatin occupancy	Link to Paper	OK
Tue Jan 11 (9am)	Bernardini - Sarasso	Real-time DNA sequencing from single polymerase molecules	LINK to paper	OK
B.I.	Cerutti-Gandini	TRIM24 links a non-canonical histone signature to breast cancer	Link to paper	OK
	Enrico - Vaccari	Small regulatory RNAs inhibit RNA Polymerase II during the elongation phase of transcription	Link to paper	OK
Wed. Jan 12, 4 pm	Riganò-Bellomo	Long non-coding RNAs with enhancer-like function	Link to paper	OK
	Cati-Ambrogio	Striatal microRNA controls cocaine intake throught CREB signalling	Link to paper	OK
	Cimino-Schimenti	Coordinate control of gene expression noise and interchromosomal interactions in a MAP kinase pathway	Link to paper	OK
Thu Jan 13 (2 PM)	DeRose-Lunardelli	Reciprocal intronic and exonic histone modification regions in humans	LINK to paper	OK
B.I.	De Angelis-Villarroel	RNA sequencing shows no dosage compensation of the active x-chromosome	LINK to paper	OK
	Tatullo Vergnano	Regulation of alternative splicing by histone modification	LINK to paper	OK
	Giacone - Tafur	Heterochromatin silencing of p53 target genes by a small viral protein	LINK to paper	OK
Mon. Jan 17, 11am	Torta-Carrara	Genetic regulation of immune response mediated by Bcl-6 and NF-kB	LINK to paper	OK
	Brossa-Girardi	Transcriptional regulation of BRCA1 expression by a metabolic switch	link to paper	OK
	Astesana-Cavalera	Methyl-binding protein mediates gene silencing and promotes tumour cell motility and invasion	LINK to paper	OK
Wed. Jan 19, 4pm	Moiso	lncRNAs as epigenetic regulators: the HOTAIR example	LINK to paper	LINK to paper	???
	Antonazzo	Cromatin organization marks exon-intron structure	LINK to paper	OK
	Pozzi-Scalzitti	An alternative splicing network links cell-cycle control to apoptosis.	LINK to paper	OK
	Vitiello - Agnesod	Short RNAs are transcribed from repressed Polycomb Target Genes and interact with Polycomb Repressive Complex-2;	LINK TO PAPER	OK
Fri. Jan 21, 11 am	Scandurra - Monteleone	Anti-tumor activity of splice-switching oligonucleotides	link to paper	???
	De Rosa -Castagno	Targeted inibition of miRNA maturation with morpholinos reveals a role for miR-375 in pancreatic islet development.	Link to paper	OK
	Plicato-Testore	A genome-wide RNAi screen reveals determinants of human embryonic stem cell identity	LINK to paper	OK
	Campolo- Baravalle	Association of Tat with Promoters of PTEN and PP2A Subunits is Key of Transcriptional Activation of Apoptotic Pathways in HIV-Infected CD4+ T Cells	Link to paper
Lunedì 24/1 ore 9-12, aula C	Perino - Xiaoxia	The epithelial splicing factors ESRP1 and ESRP2 positively and negatively regulate diverse types of alternative splicing events	Link to paper	OK
Turno di recupero 1		Scrivete qui il titolo del lavoro che intendete presentare. Quindi selezionate la scritta "Link to paper che sta qui a destra, quindi cliccate sul simbolo catenella che sta sul banner: vi compare una finestrella dove copiare il link alla pagina web che contiene l'articolo da voi scelto. Cancellate queste istruzioni.	Link to paper
	Andrione-Falcomatà	The histone H3K36 MT MES-4 acts epigenetically to transmit memory of germline gene expression to progeny	Link to paper	OK
	Bocchero	Pathology tissue–chromatin immunoprecipitation, coupled with high-throughput sequencing, allows the epigenetic profiling of patient samples	Link to paper	OK
Venerdì 28/1 ore 9 aula B	Antonazzo	Chromatin organization marks exon-intron structure.	Link to paper	OK
turno di recupero 2	Scandurra-Monteleone	qiRNA is a new type of small interfering RNA induced by DNA damage	Link to paper	OK
	Cerri	Paternally induced transgenerational environmental reprogramming of metabolic gene expression in mammals	Link to paper	OK
	Baravalle- Campolo	Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing.	link to paper	OK
ore 15	Daveggio	Fox-3 and PSF interact to activate neural cell-specific alternative splicing.	link to paper	OK
	Piretta	Maternal mRNA deadenylation and decay by the piRNA pathway in the early Drosophila embryo	Link to paper	OK
	Garcia	Opposing microRNA families regulate self-renewal in mouse embrionic stem cells	link to paper	OK