Student's talk CALENDAR

All the students should give a presentation before the end of the course. Therefore the schedule should be tight enough. Please build the calendar of student's talk in from Decmber 18 through January 23.
2 students= 30 min - An afternoon session can host up to 6-7 presentations
Please take care to group presentations of similar subjects together.
Therefore, you are kindly asked to put a link to PubMed' abstract of the paper you've chosen and a short title. To do so, when in Edit mode, select the text you want to link, e.g. the name of the author you just wrote or the PMID number, then click the "link" button (the one that resembles a chain, just below the "bold" button, and finally paste the URL you copied from the NCBI page containing the abstract into the box.
Printer-friendly version

calendar of student's talk

Date
 Speakers
 Subject (please link to abstract)
Friday, December 18, 2pm
 *Talmon, Caputo



*Larovere, Pastori




*Vicino, Teixeira
 Abstract links:
* PMID: 19917133 Asmann 2009: 3' tag digital expression profiling

*PMID: 19846608High- resolution nucleosome mapping reveals transcription dependent promoter packaging.

*PMID: 19169241 Post-transcriptional processing generates a diversity of 5'-modified long and short RNAs. Fejes-Toth,Sotirova et al.
Tuesday, December 22, 2pm

*Iachia Y Baca, Fava


 *PMID: 19765810 Zhang 2009. A Genome-wide RNAi Screen for Modifiers of the Circadian Clock in Human Cells. Cell
Friday, January 8, 2pm

COMPLETO ci sono già 6 lavori !

*Macrì D-Macrì M-Raimo (autorizzato data la complessità, inclusi materiali supplementari)




* Foglietta, Gallio



*Porrera, Rapelli



*Mana, Valenti



*Chierto, Daga

*PMID: 19829295
Lister et al. Human DNA methylomes at base resolution show widespread epigenomic differences.

+ suppl.


* PMCID: PMC2206135 14-3-3 Proteins recognize a histone code at histone H3 and are required for transcriptional activation

*PMCID: 2770259 The Schizosaccharomyces pombe JmjC-protein, Msc1, prevents H2A.Z localization in centromeric and subtelomeric chromatin domains.


* PMID: 19037247 Nuclear receptor corepressor and histone deacetylase 3 govern circadian metabolic physiology.


*PMID: 19687298 Chromatin architecture and transcription factor binding regulate expression of erythrocyte membrane protein genes.
Wedensday, January 13, 4 pm
 (max two talks)
Thursday, January 14, 4 pm

 (max two talks)
Friday, January 15, 2pm

* Béthaz-Ferrero


* Bonzano-Grosso


* Benvenuti, Giordano, Goffi (2 articoli)




*Nato, Ubezzi

*Solia

* PMID: 19335913 Steinhoff 2009: expression profile of imprinted genes

* PMID: 19534766 She X et al.,2009: epigenetics of housekeeping and tissue-enriched genes

*PMCID: PMC2703880 Jean Hausser et all.: MirZ, an integrated microRNA expression

* PMCID: PMC2775596 Jean Hausser et all. :Relative contribution of sequence and structure features to the mRNA binding

*PMID: 19846761 26G endo-siRNAs regulate spermatogenic and zygotic
gene expression in Caenorhabditis elegans

*PMID: 19874056 Rapid determination of RNA accessible sites by surface plasmon resonance detection of hybridization to DNA arrays. Mandir 2009

Wedensday, January 20, 4pm


*De Martino-Marra-Pace





Silvia Boschi, Valeria Marmo







 PMID: 20044349
Molecular mechanisms of eukaryotic pre-mRNA 3' end processing regulation
PMID: 20043923
Alternative splicing regulatory network reconstruction from exon array data

PMID: 19716791
"Altered nuclear retention of mRNAs containing inverted repeats in human embryonic stem cells: functional role of a nuclear noncoding RNA" Chen LL, Carmichael GG 2009.
Thursday, January 21, 2 pm








*Filice, Licheri

*Cipriani, De Nicolò

*Chiovatero, Palmara

*Macchia, Morando



PMCID: PMC2661803
The dynamic DNA methylomes of double - stranded DNA viruses associated with human cancer

*PMID: 19910374 Functional properties and evolutionary splicing constraints on a composite exonic regulatory element of splicing in CFTR exon 12

*PMID: 19528076 Detection of single nucleotide variations in expressed exons of the human genome using RNA-Seq.

*PMID: 19214204 Chittaranjan S. et al, 2009: Steroid hormone control of cell death and cell survival: molecular insights using RNAi
Friday, January 22, 2pm

De Stasi Angela Michela



Parrini Martina, Pugliese Maria Lucia







Giada Pertosa e Angelica Foggetti










*Di Croce, Bono







*Rugolo

 

 

 

 *Calfapietra, La Montagna

*PMCID: PMC2742397

"Inactive X chromosome-specific reduction in placental DNA methylation"
Emily L. Petty et al.2009 .

*PMCID: PMC2694474

"Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver" Alayne L. Brunner et al.2009


PMID: 19762510

"An inducible change in Fox-1/A2BP1 splicing modulates the alternative splicing of downstream neuronal target exons"

Lee JA, Tang ZZ, Black DL 2009



*PMID: 19073934 RNA interference and retinoblastoma-related genes are required for repression of endogenous siRNA targets in C.elegans


PMID: 19182803
Differential chromatin marking of introns and expressed exons by H3K36me3.
Paulina Kolasinska-Zwierz et al. 2009

PMID: 19923923 :Epigenetic control of the expression of a primate-specific microRNA cluster in human cancer cells. 2009 Nov;4

Notes and comments:
You may try to put other dates if needed, but they need Prof' approval.
EXCEPT Tuesday January 12: De Bortoli won't be in Turin!